Kouta Mayanagi

photo:Kouta Mayanagi
Degree
Ph.D.
Position, Research site
Assistant Professor, Kyushu University Medical Institute of Bioregulation
URL
http://vsb.bmr.kyushu-u.ac.jp/VSB/index_en.html
Research Field
Structural Biology

Publication

  1. Aramaki S, Mayanagi K, Aoyama K, Yasunaga T. Revealing the intracellular ultrastructure of filopodia with cryo-electron tomography. Microscopy (Oxf). 2014 Nov;63 Suppl 1:i33-i34. doi: 10.1093/jmicro/dfu071.
  2. Takeuchi K, Nishino T, Mayanagi K, Horikoshi N, Osakabe A, Tachiwana H, Hori T, Kurumizaka H, Fukagawa T. The centromeric nucleosome-like CENP-T-W-S-X complex induces positive supercoils into DNA. Nucleic Acids Res. 2014 Feb;42(3):1644-55. doi: 10.1093/nar/gkt1124. Epub 2013 Nov 14.
  3. Naoyuki Kuwabara, Yasuto Murayama, Hiroshi Hashimoto, Yuuichi Kokabu, Mitsunori Ikeguchi, Mamoru Sato, Kouta Mayanagi, Hiroshi Iwasaki, Toshiyuki Shimizu. Mechanistic insights into the activation of the Rad51-mediated strand exchange fromthe structure of a recombination activator, Swi5-Sfr1 complex. Structure 20(3):440-449 (2012).
  4. HiromiOgino, Sonoko Ishino,KoutaMayanagi, Gyri Teien Haugland, Nils Kare Birkeland, Akihiko Yamagishi, Yoshizumi Ishino. The GINS complex from the thermophilic archaeon, Thermoplasma acidophilum may function as a homotetramer in DNA replication. Extremophiles 15(4):529-539 (2011).
  5. Takuji Oyama, Sonoko Ishino, Seiji Fujino, Hiromi Ogino, Tsuyoshi Shirai, Kouta Mayanagi, Mihoko Saito, Naoko Nagasawa, Yoshizumi Ishino, Kosuke Morikawa. Architectures of archaeal GINS complexes, essential DNA replication initiation factors. BMCBiol. 9: 28 (2011).
  6. Kiyouhira Ohnishi, Kumiko Nakahira, Satoru Unzai, Kouta Mayanagi, Horoshi Hashimoto, Kentaro Shiraki, Takeshi Honda, Itaru Yanagihara, Relationship between heat-induced fibrillogenicity and hemolytic activity of thermostable direct hemolysin and a related hemolysin of Vibrio parahaemolyticus FEMSMicroBiolLett. 318(1):10-17 (2011).
  7. *KoutaMayanagi, Shinichi Kiyonari, Hirokazu Nishida, Mihoko Saito, Daisuke Kohda, Yoshizumi Ishino, Tsuyoshi Shirai, Kosuke Morikawa, Architecture of the DNA polymerase B-proliferating cell nuclear antigen (PCNA)-DNA ternary complex. PNAS, 108, 1845-1849 (2011)
  8. Itaru Yanagihara, Kumiko Nakahira, Tsutomu Yamane, Shuji Kaieda, Kouta Mayanagi, Daizo Hamada, Takashi Fukui, Kiyouhisa Ohnishi, Shin’ichiro Kajiyama, Toshiyuki Shimizu, Mamoru Sato, Takahisa Ikegami, Mitsunori Ikeguchi, Takeshi Honda, Hiroshi Hashimoto. Structure and functional characterization of Vibrio parahaemolyticus thermostable direct hemolysin (TDH). J BiolChem. 285(21):16267-74 (2010)
  9. 西田洋一, 真柳浩太, 石野良純, 森川耿助: DNAクランプ／複製DNAポリメラーゼ複合体におけるDNA合成・修正スイッチング機構．日本結晶学会誌, 52, 201-207 (2010)
  10. 真柳浩太, 廣明秀一, 白井 剛, ７章 構造決定法、タンパク質の立体構造入門 藤博幸 編 (講談社) (2010)
  11. Masayuki Oda, Susumu Uchiyama, Masanori Noda, Yoshinori Nishi, Maiko Koga, Kouta Mayanagi, Carol V. Robinson, Kiichi Fukui, Yuji Kobayashi, Kosuke Morikawa, Takachika Azuma. Effects of antibody affinity and antigen valence on molecular forms of immune complexes. Molecular Immunology, 47, 357-364 (2009).
  12. Hirokazu Nishida, KoutaMayanagi, Shinich Kiyonari, Yuichi Sato, Takuji Oyama, Yoshizumi Ishino, Kosuke. Morikawa. Structural determinant for switching between the polymerase and exonuclease modes in the PCNA-replicative DNA polymerase complex. PNAS, 106, 20693-20698 (2009).
  13. Kouta Mayanagi, Shinichi Kiyonari, Mihoko Saito, Tsuyoshi Shirai, Yoshizumi Ishino, Kosuke Morikawa, Mechanism of replication machinery assembly as revealed by the DNA ligase-PCNA-DNA complex architecture. PNAS, 106, 4647-4652 (2009).
  14. Takuji Oyama, Hayato Oka, Kouta Mayanagi, Tsuyoshi Shirai, Kyoko Matoba, Ryosuke Fujikane, Yoshizumi Ishino, Kosuke Morikawa, Atomic structures and functional implications of the archaeal RecQ-like helicase Hjm BMCStructuralBiology, 9, 2 (2009).
  15. Atsushi Miyagi, Yasuo Tsunaka, Takayuki Uchihashi, Kouta Mayanagi, Susumu Hirose, Kosuke Morikawa, Toshio Ando. Visualization of intrinsically disordered regions of proteins by high-speed atomic force microscopy. Chemphyschem. 9,1859-1866, (2008).
  16. Yasuto Murayama, Yumiko Kurokawa, Kouta Mayanagi, Hiroshi Iwasaki, Formation and branch migration of Holliday junctions mediated by eukaryotic recombinases. Nature 451,1018-1021, (2008).
  17. Yoshie Fujiwara, KoutaMayanagi, Kosuke Morikawa, Functional significance of octameric RuvA for a branch migration complex from Thermus thermophilus. BBRC 366, 426-431, (2008).
  18. *KoutaMayanagi, Yoshie Fujiwara, Tomoko Miyata, Kosuke Morikawa, Electron microscopic single particle analysis of a tetrameric RuvA/RuvB/Holliday junction DNA complex.BBRC365, 273-278, (2008).
  19. 村山泰斗、黒川裕美子、真柳浩太、岩崎博史：真核生物のリコンビナーゼによるホリディ構造の形成と分岐点移動．細胞工学、27（6）：596-597 (2008)
  20. 真柳浩太、清成信一：DNAクランプと複製因子の切換え機構．生物物理、50 (1) : 032-033 (2008) (査読有)
  21. Daizo Hamada, Takashi Higurashi, Kouta Mayanagi, Tomoko Miyata, Takashi Fukui, Tetsuya Iida, Takeshi Honda, Itaru Yanagihara, Tetrameric structure of Thermostable Direct Hemolysin from Vibrio parahaemolyticus revealed by Ultracentrifugation, Small Angle X-ray Scattering and Electron Microscopy. J.Mol.Biol. 365, 187-195, (2007).
  22. 鈴木博文、宮田知子、真柳浩太、石野良純、大山拓次、森川耿右：DNAにクランプをはめ込むしくみ 単粒子解析で見えた生き生きとした姿．生物物理、46 (6)、345-348 (2006)
  23. Takahashi Fukui, Kentaro Shiraki, Daizo Hamada, Kojiro Hara, Tomoko Miyata, Shinsuke Fujiwara, Kouta Mayanagi, Keiko Yanagihara, Tetsuya Iida, Eiichiro Fukusaki, Tadayuki Imanaka, Takeshi Honda, Itaru Yanagihara. Thermostable direct hemolysin of Vibrio parahaemolyticus is a bacterial reversible amyloid toxin. Biochemistry 44, 9825-9832, (2005).
  24. Tomoko Miyata, Hirofumi Suzuki, Takuji Oyama, Kouta Mayanagi, Yoshizumi Ishino, Kosuke Morikawa: Open clamp structure in the clamp-loading complex visualized by electron microscopic image analysis. Proc.Natl.Acad. Sci.USA, 102, 13795-13800, (2005).
  25. Kyoko Matoba, Mitsuyoshi Yamazoe, Kouta Mayanagi, Kosuke Morikawa, Sota Hiraga: Comparison of MukB homodimer versus MukBEF complex molecular architectures by electron microscopy reveals a higher-order multimerization. BBRC 333, 694-702, (2005).
  26. *真柳浩太：電子顕微鏡単粒子解析で「見る」超分子複合体．
    バイオサイエンスとインダストリー、63(6): 9-10. (2005)
  27. 真柳浩太：超分子複合体の電子顕微鏡単粒子解析、バイオサイエンスとインダストリー、63(6): 26-29. (2005)
  28. Tomoko Miyata, Takuji Oyama, Kouta Mayanagi, Sonoko Ishino, Yoshizumi Ishino, Kosuke Morikawa: The Clamp-loading Complex for Processive DNA Replication. Nature Struct. &Molec.Biol. 11, 632-636, (2004)
  29. 関口睦夫、森川耿右、楯真一、真柳浩太、藤博幸、日高真純、岡崎賢二、陣上久人、藤井郁雄 生命の謎を解く タンパク質研究からのアプローチ"（関口睦夫・森川耿右 編 共立出版）(2004)
  30. Norikazu Yabuta, Naoko Kajimura, Kouta Mayanagi, Michio Sato, Takahito Gotow, Yasuo Uchiyama, Yukio Ishimi, Hiroshi Nojima Mammalian Mcm2/4/6/7 complex forms a toroidal structure. Genes toCells 8、413-421 (2003).
  31. Kyoko Matoba, Kouta Mayanagi, Syo Nakasu, Akihiko Kikuchi, Kosuke Morikawa: Three-dimensional electron microscopy of the reverse gyrase from Sulfolobus tokodaii. BBRC 297, 749-755, (2002).
  32. Kazuhiro Yamada, Tomoko Miyata, Daisuke Tsuchiya, Takuji Oyama, Yoshie Fujiwara, Takayuki Ohnishi, Hiroshi Iwasaki, Hideo Shinagawa, Mariko Ariyoshi, KoutaMayanagi, Kosuke Morikawa: Crystal structure of the RuvA-RuvB complex: A structural basis for the Holliday junction migrating motor machinery Mollecular Cell 10, 671-681, (2002)
  33. Kozo Hamada, Tomoko Miyata, Kouta Mayanagi, Junji Hirota, Katsuhiko Mikoshiba: Two-state conformational changes in Inositol 1,4,5-trisphosphate receptor regulated by calcium. J.Biol.Chem. 277, 21115-21118, (2002).
  34. Naoko Kajimura, Matsuyo Yamazaki, Kosuke Morikawa, Akio Yamazaki, Kouta Mayanagi: Three-dimensional structure of non-activated cGMP phosphodiesterase 6 and comparison of its image with those of activated forms. J. Struct. Biol. 139, 27-38, (2002)
  35. Akihiro Narita, Takuo Yasunaga, Takashi Ishikawa, Kouta Mayanagi, Takeyuki Wakabayashi: Ca2+-induced switching of troponin and tropomyosin on actin filaments as revealed by electron cryo-microscopy. J.Mol.Biol. 308, 241-261, (2001)
  36. Kouta Mayanagi, Tomoko Miyata, Takuji Oyama, Yoshizumi Ishino, Kosuke Morikawa: Three-dimensional electron microscopy of the clamp loader small subunit from Pyrococcus furiosus. J. Struct.Biol. 134, 35-45. (2001)
  37. Kazuhiro Yamada, Naoki Kunishima, Kouta Mayanagi, Takayuki Ohnishi, Tatsuya Nishino, Hiroshi Iwasaki, Hideo Shinagawa, Kosuke Morikawa: Crystal structure of the Holliday junction migration motor protein RuvB from Thermus thermophilus HB8. Proc.Natl.Acad. Sci.USA, 98, 1442-1447. (2001)
  38. Yong-Woon Han, Hiroshi Iwasaki, Tomoko Miyata, Kouta Mayanagi, Kazuhiro Yamada, Kosuke Morikawa, Hideo Shinagawa: A unique beta-hairpin protruding from AAA+ ATPase domain of RuvB motor protein is involved in the interaction with RuvA DNA recognition protein for branch migration of Holliday junctions. J.Biol.Chem. 276, 35024-35028. (2001)
  39. 真柳浩太、宮田知子: 電子顕微鏡によるDNA 結合蛋白質複合体の単粒子解析．細胞工学、20(10): 1350-1358 (2001)
  40. Tomoko Miyata, Kazuhiro Yamada, Hiroshi Iwasaki, Hideo Shinagawa, Kosuke Morikawa, Kouta Mayanagi: Two different oligomeric states of the RuvB branch migration motor protein as revealed by electron microscopy J. Struct. Biol. 131, 83-89. (2000)
  41. Kayoko Komori, Tomoko Miyata, Jocelyne DiRuggiero, Rhonda Holley-Shanks, Ikuko Hayashi, Isaac KO Cann, Kouta Mayanagi, Hideo Shinagawa, Yoshizumi Ishino.: Both RadA and RadB are involved in homologous recombination in Pyrococcus furiosus. J BiolChem, 275, 33782-33790. (2000)
  42. *Kouta Mayanagi, Takashi Ishikawa, Chikashi Toyoshima, Yorinao Inoue, Katsuyoshi Nakazato: Three-dimensional electron microscopy of the photosystem II core complex., J. Struct.Biol. 123(3):211-224. (1998)
  43. Yasuaki Hiromasa, Yoichi Aso, Kouta Mayanagi, Yorinao Inoue, Tetsuro Fujisawa, Koji Meno, Tatzuo Ueki: Guanidine hydrochloride- induced changes of the E2 inner core of the Bacillus stearothermophilus pyruvate dehydrogenase complex. J.Biochem.123, 564-567. (1998)
  44. Shunjiro Shinohara, Kenichi Yamagishi, Satoshi Ohdachi, Akira Ejiri, Kota Mayanagi, Yoshihiro Shimazu, Kenro Miyamoto: Wall conditioning and its effect on RFP plasma performance in REPUTE-1. Plasma Physics and Controlled Fusion, 34, 627-633 (1992)
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