Hierarchical Modeling of Interactions Among Biomolecules

Research Project Outline

We aim to construct the integrated simulation system for the prediction of biomolecular complexes and the analysis of their functional mechanisms. This novel simulation method gradually shifts from coarse-grained models to the finer-grained ones, selecting more possible candidates from a large number of model complex structures and then accessing a small number of candidates accurately. Thus we intend to realize effective and accurate modeling of protein-ligand and proteinprotein interactions.

Research Director
AkioKitao
Affiliation
Associate Professor, The University of Tokyo
Research Started
2007
Status
ongoing
Research Area
High Performance Computing for Multi-Scale and Multi-Physics Phenomena
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